Function reference • PhONA

All functions
`PhONA()`	Run PhONA
`getMean()`	Run Linear Models
`lasso()`	Run Lasso Models
`model.lasso()`	Run Lasso Models
`model.linear()`	Run Linear Models
`node.role()`	Run Node Roles using rnetcarto
`read.mothur.shared()`	Reads .shared file from mothur
`read.mothur.taxonomy()`	Reads taxonomy file from mothur
`remove_rare()`	Remove rare observation based on prevalence percentage and/or minimum count
`rolePlot()`	Run Lasso Models
`summarizePhONA()`	Summarize graph object
`taxacolor()`	Function to assign color to the phyloseq object

Reference